INTRODUCING

Jenia Sklyar

Ph.D Student

Structural characterization of carotenoid binding proteins

My research is focused on the structural characterization of carotenoid-binding proteins in cyanobacteria through various methods like biochemical analysis, genetic engineering, and X-ray crystallography. Carotenoid-binding proteins are essential for the photoprotection process that occurs when cyanobacteria are exposed to excess light. The orange carotenoid protein (OCP) plays a crucial role in this process by dissipating the absorbed light energy as heat. The OCP physically attaches to the phycobilisome (PBS), preventing energy transfer to the photosynthetic reaction centers (RCs). The OCP contains two domains – an active N-terminal domain (NTD) and a regulatory C-terminal domain (CTD). Homologs of the CTD (CTDH) are suggested to uptake carotenoids from the thylakoid membrane and transfer the carotenoid to helical carotenoid proteins (HCPs), which are paralogs of the NTD. Holo-HCPs have various functions such as carotenoid carriers, singlet oxygen quenchers, and energy quenching proteins. However, some of their unique crystal structures have not been solved yet. Our primary objectives are to determine the high-resolution crystal structures of the holo/apo-OCP homologs and investigate the mechanism of carotenoid binding and transfer from membranes.

Crystal Structures

In our recent publication titled “Insights into energy quenching mechanisms and carotenoid uptake by orange carotenoid protein homologs: HCP4 and CTDH” we have presented the first crystal structure of the holo-HCP4 binding canthaxanthin molecule (PDB: 8QX5) and an improved structure of the apo-CTDH from Anabaena sp. PCC 7120 (PDB: 8QX7). Based on these structures, we have proposed models of the binding of the HCP4 to the PBS and the associated energy-quenching mechanism.

8QX7

Apo-C-Terminal Domain Homolog of the Orange Carotenoid Protein from Anabaena at a resolution of 1.95 Å​

8QX5

Helical Carotenoid Protein 4 (HCP4) from Anabaena with bound Canthaxanthin

8OZO

Populus tremula stable protein 1 with N-terminal binding peptide extension

8OZS

Populus tremula stable protein 1 with N-terminal binding peptide extension with hemin

8OZ4

Populus tremula stable protein 1 with an alternate crystal lattice

Latest Publication

Insights into energy quenching mechanisms and carotenoid uptake by orange carotenoid protein homologs: HCP4 and CTDH

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